STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N444_GASACC1q and TNF related 6b. (246 aa)    
Predicted Functional Partners:
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.729
G3NWE8_GASAC
Thrombospondin, type I, domain containing 7Ba.
   
  
 0.649
G3NMB3_GASAC
Angiopoietin-like 7.
      
 0.599
G3NLE8_GASAC
TELO2 interacting protein 1.
      
 0.590
G3PT66_GASAC
Dual specificity phosphatase 28.
   
  
 0.550
G3P2Q3_GASAC
Fibronectin type III domain containing 1.
   
  
 0.540
G3NWK5_GASAC
Collagen, type XVI, alpha 1.
    
 
 0.454
G3Q536_GASAC
Tektin 4.
   
  
 0.432
G3N470_GASAC
Thrombospondin, type I, domain containing 7Aa.
   
  
 0.406
G3PHE0_GASAC
Uncharacterized protein.
   
  
 0.406
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.