Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RASGEF1BRasGEF domain family member 1B. (473 aa)    
Predicted Functional Partners:
G3P7F2_GASAC
RAS p21 protein activator (GTPase activating protein) 1a.
    
 
 0.677
G3PWG4_GASAC
Rap guanine nucleotide exchange factor (GEF) 2.
    
  0.581
G3QCJ1_GASAC
Rap guanine nucleotide exchange factor (GEF) 6.
    
  0.581
G3PCK2_GASAC
Uncharacterized protein.
      
 0.548
G3NP71_GASAC
Unc-5 netrin receptor Db.
      
 0.540
G3PTH7_GASAC
Unc-5 netrin receptor Da.
      
 0.540
G3NML4_GASAC
V-ral simian leukemia viral oncogene homolog Aa (ras related).
    
 0.527
G3NX76_GASAC
V-ral simian leukemia viral oncogene homolog Ba (ras related).
    
 0.527
G3N5A4_GASAC
Ras protein-specific guanine nucleotide-releasing factor 2a.
   
  0.519
G3NRA4_GASAC
Ras protein-specific guanine nucleotide-releasing factor 2b.
   
  0.519
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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