STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N457_GASACZgc:65997; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (263 aa)    
Predicted Functional Partners:
G3NMZ0_GASAC
RUNX1 partner transcriptional co-repressor 1.
   
 0.590
G3NRR8_GASAC
CBFA2/RUNX1 partner transcriptional co-repressor 2.
   
 0.590
G3P7B1_GASAC
Uncharacterized protein.
   
 0.590
G3P939_GASAC
Mediator complex subunit 27.
   
 0.590
G3PA78_GASAC
Cytochrome P450, family 3, subfamily c, polypeptide 3; Belongs to the cytochrome P450 family.
   
 0.590
G3PJ20_GASAC
Thromboxane A synthase 1 (platelet); Belongs to the cytochrome P450 family.
   
 0.590
G3PRX4_GASAC
CBFA2/RUNX1 partner transcriptional co-repressor 3.
   
 0.590
G3PWP1_GASAC
Cytochrome P450, family 3, subfamily A, polypeptide 65; Belongs to the cytochrome P450 family.
   
 0.590
G3PWQ0_GASAC
Cytochrome P450, family 3, subfamily A, polypeptide 65.
   
 0.590
G3PWR0_GASAC
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.590
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.