STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N457_GASACZgc:65997; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (263 aa)    
Predicted Functional Partners:
G3PHV4_GASAC
Dehydrogenase/reductase (SDR family) member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.663
G3QA38_GASAC
Dehydrogenase/reductase (SDR family) member 11a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.661
G3PW42_GASAC
Retinol dehydrogenase 8b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.605
G3PB20_GASAC
TLC domain containing 1.
      
 0.551
G3NCQ8_GASAC
Dehydrogenase/reductase (SDR family) member 7Cb.
   
 
 0.535
G3PNE2_GASAC
Dehydrogenase/reductase (SDR family) member 7Ca; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.535
G3PFC3_GASAC
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.525
G3P670_GASAC
Retinol dehydrogenase 8a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.478
G3PPB3_GASAC
Uncharacterized protein.
    
   0.468
G3P506_GASAC
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.457
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.