Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3N461_GASACCCHC-type zinc finger, nucleic acid binding protein a. (170 aa)    
Predicted Functional Partners:
G3NXK6_GASAC
Heterogeneous nuclear ribonucleoprotein K.
   
  
 0.878
G3PUV4_GASAC
Heterogeneous nuclear ribonucleoprotein K, like.
   
  
 0.878
G3NHE9_GASAC
Ribosomal protein L30.
   
 
 0.859
G3PNH9_GASAC
SERPINE1 mRNA binding protein 1a.
   
 
 0.846
G3PUL5_GASAC
SERPINE1 mRNA binding protein 1b.
   
 
 0.846
G3PZS7_GASAC
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.845
G3NMQ4_GASAC
Ribosomal protein L4.
   
   0.844
G3NBG2_GASAC
Ribosomal protein L8.
   
   0.832
G3PV23_GASAC
Mtr4 exosome RNA helicase.
   
 0.817
RPL37A
Ribosomal protein L37a.
   
   0.799
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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