STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N470_GASACThrombospondin, type I, domain containing 7Aa. (1590 aa)    
Predicted Functional Partners:
G3NT88_GASAC
Protein O-fucosyltransferase 2.
     
 0.539
G3PC34_GASAC
Beta 3-glucosyltransferase a.
    
  0.531
G3QBA2_GASAC
Beta 3-glucosyltransferase b.
    
  0.531
G3NCC1_GASAC
Sphingomyelin phosphodiesterase 3, neutral.
     
 0.494
G3PRZ6_GASAC
UDP-glucose ceramide glucosyltransferase.
   
 
  0.494
G3Q623_GASAC
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.409
COL22A1
Collagen type XXII alpha 1 chain.
    
  0.402
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.