BICD2 protein (Gasterosteus aculeatus) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

BICD2

BICD cargo adaptor 2. (850 aa)

Predicted Functional Partners:

G3NTF7_GASAC

0.903

RANBP2

0.897

G3NRG0_GASAC

0.855

G3PRU5_GASAC

0.855

G3NMJ3_GASAC

0.845

G3Q8T6_GASAC

0.845

G3NHU8_GASAC

0.795

G3PKK8_GASAC

0.795

G3PYH9_GASAC

0.795

G3QAJ0_GASAC

0.795

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BICD2	G3NHU8_GASAC	ENSGACP00000000094	ENSGACP00000004908	BICD cargo adaptor 2.	RAB6B, member RAS oncogene family a.	0.795
BICD2	G3NMJ3_GASAC	ENSGACP00000000094	ENSGACP00000006556	BICD cargo adaptor 2.	Dynactin 1b.	0.845
BICD2	G3NRG0_GASAC	ENSGACP00000000094	ENSGACP00000007927	BICD cargo adaptor 2.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.855
BICD2	G3NTF7_GASAC	ENSGACP00000000094	ENSGACP00000008625	BICD cargo adaptor 2.	Dynactin 2 (p50).	0.903
BICD2	G3PKK8_GASAC	ENSGACP00000000094	ENSGACP00000018138	BICD cargo adaptor 2.	Uncharacterized protein.	0.795
BICD2	G3PRU5_GASAC	ENSGACP00000000094	ENSGACP00000020331	BICD cargo adaptor 2.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.855
BICD2	G3PYH9_GASAC	ENSGACP00000000094	ENSGACP00000022669	BICD cargo adaptor 2.	RAB41, member RAS oncogene family.	0.795
BICD2	G3Q8T6_GASAC	ENSGACP00000000094	ENSGACP00000026300	BICD cargo adaptor 2.	CAP-Gly domain-containing protein.	0.845
BICD2	G3QAJ0_GASAC	ENSGACP00000000094	ENSGACP00000026906	BICD cargo adaptor 2.	RAB6A, member RAS oncogene family.	0.795
BICD2	RANBP2	ENSGACP00000000094	ENSGACP00000009078	BICD cargo adaptor 2.	RAN binding protein 2.	0.897
G3NHU8_GASAC	BICD2	ENSGACP00000004908	ENSGACP00000000094	RAB6B, member RAS oncogene family a.	BICD cargo adaptor 2.	0.795
G3NHU8_GASAC	G3NMJ3_GASAC	ENSGACP00000004908	ENSGACP00000006556	RAB6B, member RAS oncogene family a.	Dynactin 1b.	0.721
G3NHU8_GASAC	G3NRG0_GASAC	ENSGACP00000004908	ENSGACP00000007927	RAB6B, member RAS oncogene family a.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.517
G3NHU8_GASAC	G3NTF7_GASAC	ENSGACP00000004908	ENSGACP00000008625	RAB6B, member RAS oncogene family a.	Dynactin 2 (p50).	0.530
G3NHU8_GASAC	G3PRU5_GASAC	ENSGACP00000004908	ENSGACP00000020331	RAB6B, member RAS oncogene family a.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.517
G3NHU8_GASAC	G3Q8T6_GASAC	ENSGACP00000004908	ENSGACP00000026300	RAB6B, member RAS oncogene family a.	CAP-Gly domain-containing protein.	0.721
G3NHU8_GASAC	RANBP2	ENSGACP00000004908	ENSGACP00000009078	RAB6B, member RAS oncogene family a.	RAN binding protein 2.	0.614
G3NMJ3_GASAC	BICD2	ENSGACP00000006556	ENSGACP00000000094	Dynactin 1b.	BICD cargo adaptor 2.	0.845
G3NMJ3_GASAC	G3NHU8_GASAC	ENSGACP00000006556	ENSGACP00000004908	Dynactin 1b.	RAB6B, member RAS oncogene family a.	0.721
G3NMJ3_GASAC	G3NRG0_GASAC	ENSGACP00000006556	ENSGACP00000007927	Dynactin 1b.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.937