STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N476_GASACPHD finger protein 14. (899 aa)    
Predicted Functional Partners:
G3NGU3_GASAC
High mobility group 20A.
   
 
 0.991
G3P2Z1_GASAC
Testis expressed 10.
    
   0.882
G3PNT4_GASAC
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
    
   0.775
G3NW01_GASAC
PHD-type domain-containing protein.
   
 
 0.686
G3PEF0_GASAC
Retinoic acid induced 1.
   
 
 0.646
G3NLD5_GASAC
Zinc finger, CCCH-type with G patch domain.
      
 0.631
G3PWE6_GASAC
Zinc finger protein 618.
      
 0.625
G3NJH1_GASAC
Translin-associated factor X.
      
 0.583
G3NYP3_GASAC
PHD finger protein 21Ab.
   
 
 0.558
G3PKA3_GASAC
2-oxoglutarate and iron-dependent oxygenase domain containing 2.
      
 0.538
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.