STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N4Q4_GASACUncharacterized protein. (176 aa)    
Predicted Functional Partners:
G3NU10_GASAC
Sp1 transcription factor.
    
 0.919
G3NRM9_GASAC
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.900
G3PER2_GASAC
Progesterone receptor.
   
0.873
G3Q9R0_GASAC
Nuclear receptor interacting protein 1b.
    
 0.869
G3P8C1_GASAC
V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.
    
 0.851
G3NM42_GASAC
E1A binding protein p300 a.
    
 0.844
G3NY16_GASAC
E1A binding protein p300 b.
    
 0.844
G3PBM0_GASAC
CREB binding protein b.
    
 0.811
G3Q4J0_GASAC
CREB binding protein a.
    
 0.811
G3NPT1_GASAC
Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.806
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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