STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N5B5_GASACInhibitor of nuclear factor kappa B kinase subunit epsilon. (713 aa)    
Predicted Functional Partners:
G3NQ65_GASAC
TRAF family member-associated NFKB activator.
   
 0.986
G3Q464_GASAC
Transmembrane protein 173.
   
 0.983
G3Q620_GASAC
Optineurin.
   
 0.980
G3NYV6_GASAC
Interferon regulatory factor 3.
   
 0.977
G3NK41_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.964
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.964
G3NH52_GASAC
Deoxyribonuclease 1 like 4, tandem duplicate 1.
   
 0.963
G3NIM8_GASAC
SKICH domain-containing protein.
   
 0.957
G3PYF8_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.950
G3PV31_GASAC
Sequestosome 1.
    
 0.946
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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