STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N6G9_GASACDENN/MADD domain containing 6B. (563 aa)    
Predicted Functional Partners:
G3PBU6_GASAC
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 
  0.605
G3N6F7_GASAC
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
  
 0.507
G3PMQ1_GASAC
RUN and SH3 domain containing 2.
      
 0.481
G3NXT6_GASAC
ADAM metallopeptidase with thrombospondin type 1 motif, 10.
      
 0.465
CACNA2D3
Calcium voltage-gated channel auxiliary subunit alpha2delta 3.
   
  
 0.456
G3N9Z6_GASAC
Calcium channel, voltage dependent, alpha2/delta subunit 3.
      
 0.427
G3P0A2_GASAC
Trafficking protein particle complex 6b-like.
      
 0.418
G3NG19_GASAC
Ceramide synthase 2a.
      
 0.410
G3P728_GASAC
Ribosomal protein S6 kinase polypeptide 1.
   
   0.401
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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