STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N6S1_GASACCCHC-type domain-containing protein. (174 aa)    
Predicted Functional Partners:
G3PV23_GASAC
Mtr4 exosome RNA helicase.
   
 
 0.725
G3PRM4_GASAC
Mitochondrial ribosomal protein L16.
   
  0.647
G3NLW6_GASAC
Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner.
    
  0.593
G3NTG6_GASAC
Uncharacterized protein.
   
 
 0.586
G3P2K4_GASAC
Terminal nucleotidyltransferase 4A.
   
 
 0.586
G3PWU6_GASAC
Terminal nucleotidyltransferase 4B.
   
 
 0.586
G3NET3_GASAC
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 
 0.547
STK32A
Serine/threonine kinase 32A; Belongs to the protein kinase superfamily.
    
  0.538
G3PI88_GASAC
Ribosomal protein L10.
   
  0.522
G3PSV2_GASAC
Importin 7.
   
 
 0.501
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.