STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N6T5_GASACProtein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family. (543 aa)    
Predicted Functional Partners:
G3PQ37_GASAC
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
   
 
 0.710
G3P2T2_GASAC
ALG2 alpha-1,3/1,6-mannosyltransferase.
   
 
 0.644
G3NYY7_GASAC
Uncharacterized protein.
   
 
 0.563
G3PQW3_GASAC
ALG11 alpha-1,2-mannosyltransferase.
   
 
 0.563
G3PXZ1_GASAC
Zgc:92907.
      
 0.527
G3PAH4_GASAC
Torsin family 3, member A.
      
 0.519
G3PGG6_GASAC
RNA binding motif protein 28.
      
 0.515
G3PC06_GASAC
LMWPc domain-containing protein.
      
 0.468
G3PJ89_GASAC
Mitochondrial ribosomal protein S18A.
      
 0.444
G3Q0Q2_GASAC
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.443
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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