Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3N6T9_GASACZRAB1B, member RAS oncogene family a. (204 aa)    
Predicted Functional Partners:
G3PZ97_GASAC
USO1 vesicle transport factor.
   
 0.950
G3PXV3_GASAC
Syntaxin 5A; Belongs to the syntaxin family.
   
 0.931
G3NW67_GASAC
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.930
G3PW35_GASAC
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.925
G3NBR3_GASAC
Trafficking protein particle complex 8.
    
 0.923
G3PHK9_GASAC
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.914
G3PWI7_GASAC
Golgin A2.
    
 0.908
G3PNV7_GASAC
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.906
G3QCN1_GASAC
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.906
G3NUK4_GASAC
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.893
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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