Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N6U3_GASACFYVE, RhoGEF and PH domain containing 1. (296 aa)    
Predicted Functional Partners:
G3PA20_GASAC
Uncharacterized protein.
   
 0.713
CDC42
Cell division cycle 42.
   
 0.713
G3P6U5_GASAC
Uncharacterized protein.
   
 0.606
G3Q4B9_GASAC
Uncharacterized protein.
   
 0.606
G3PBC3_GASAC
Intersectin 2a.
     
 0.605
G3PUV9_GASAC
Intersectin 2b.
     
 0.605
G3P306_GASAC
Uncharacterized protein.
    
 0.577
G3Q5D5_GASAC
Rho guanine nucleotide exchange factor (GEF) 11.
    
 0.577
G3QCF4_GASAC
Uncharacterized protein.
    
 0.577
G3PBG4_GASAC
Intersectin 1 (SH3 domain protein).
     
 0.561
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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