Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDCL3Phosducin like 3. (245 aa)    
Predicted Functional Partners:
G3P7I0_GASAC
T-complex protein 1 subunit gamma.
   
 
 0.957
G3Q882_GASAC
T-complex protein 1 subunit delta.
   
 
 0.956
G3QB35_GASAC
Chaperonin containing TCP1, subunit 6A (zeta 1).
   
 
 0.950
G3P3G8_GASAC
T-complex 1.
   
 
 0.946
G3PP78_GASAC
Chaperonin containing TCP1, subunit 2 (beta).
   
 
 0.945
G3Q8L9_GASAC
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
 
 0.936
G3QBK5_GASAC
Chaperonin containing TCP1, subunit 8 (theta).
   
 
 0.933
G3NDS8_GASAC
Chaperonin containing TCP1, subunit 5 (epsilon).
   
 
 0.923
G3NI25_GASAC
F-box and WD repeat domain containing 4.
    
   0.903
G3PK08_GASAC
Peroxisomal biogenesis factor 7.
   
   0.899
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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