STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N704_GASACMetalloendopeptidase. (267 aa)    
Predicted Functional Partners:
G3N4C9_GASAC
Cubilin (intrinsic factor-cobalamin receptor).
   
  0.450
G3PX65_GASAC
CUB domain containing protein 2.
   
  0.450
G3NRA8_GASAC
Membrane frizzled-related protein.
    
 0.443
G3NA91_GASAC
Neuropilin; Belongs to the neuropilin family.
    
 0.440
G3NHX3_GASAC
Procollagen C-endopeptidase enhancer 2b.
   
  0.440
G3QAA4_GASAC
Procollagen C-endopeptidase enhancer a.
   
  0.440
G3N9S7_GASAC
Neuropilin; Belongs to the neuropilin family.
    
 0.417
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.