Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N706_GASACCollagen, type VII, alpha 1. (2947 aa)    
Predicted Functional Partners:
G3P675_GASAC
Angiotensin-converting enzyme.
      
 0.741
G3PQP1_GASAC
Angiotensin-converting enzyme.
      
 0.715
G3PC67_GASAC
Uncharacterized protein.
    
   0.586
G3PC70_GASAC
Uncharacterized protein.
    
   0.586
G3PC74_GASAC
Uncharacterized protein.
    
   0.586
G3PGE1_GASAC
Collagen, type VI, alpha 1.
   
 0.566
G3Q0V8_GASAC
WD_REPEATS_REGION domain-containing protein.
    
 0.471
G3Q0W5_GASAC
Uncharacterized protein.
    
 0.471
G3PC60_GASAC
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
    
  0.466
G3PTS1_GASAC
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
    
  0.466
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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