STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIYD1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (265 aa)    
Predicted Functional Partners:
G3P4E5_GASAC
Uncharacterized protein.
   
 0.994
G3Q4I3_GASAC
Uncharacterized protein.
   
 0.987
G3N6B1_GASAC
Asparaginyl-tRNA synthetase.
   
 0.971
G3P9V9_GASAC
BLM RecQ like helicase.
    
 0.971
G3PQC5_GASAC
RecQ helicase-like 4.
    
 0.960
G3NWB9_GASAC
Aspartyl-tRNA synthetase.
   
 0.932
G3PEK6_GASAC
Asparaginyl-tRNA synthetase 2, mitochondrial.
   
 0.932
G3Q4N8_GASAC
MUS81 structure-specific endonuclease subunit.
   
 0.932
G3NKI9_GASAC
Excision repair cross-complementation group 4.
   
 0.930
G3N6X3_GASAC
Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.
    
 
 0.925
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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