STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N731_GASACDEAD (Asp-Glu-Ala-Asp) box helicase 56. (367 aa)    
Predicted Functional Partners:
G3NTL5_GASAC
Ribosome production factor 2 homolog.
   
 
 0.994
G3PDL1_GASAC
CCAAT enhancer binding protein zeta.
   
 
 0.993
G3NUK0_GASAC
EBNA1 binding protein 2.
   
 0.992
G3NM70_GASAC
WD repeat domain 74.
   
 
 0.991
G3PKR4_GASAC
NOP58 ribonucleoprotein homolog (yeast).
  
 
 0.991
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.990
G3NWQ5_GASAC
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.989
G3PZV9_GASAC
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.989
G3N9R6_GASAC
RNA helicase.
  
 
 0.988
G3PGG6_GASAC
RNA binding motif protein 28.
   
 
 0.988
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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