STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N731_GASACDEAD (Asp-Glu-Ala-Asp) box helicase 56. (367 aa)    
Predicted Functional Partners:
G3NM70_GASAC
WD repeat domain 74.
   
 
 0.999
G3NTL5_GASAC
Ribosome production factor 2 homolog.
   
 
 0.996
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.994
G3PDL1_GASAC
CCAAT enhancer binding protein zeta.
   
 
 0.993
G3P5X4_GASAC
FtsJ RNA 2'-O-methyltransferase 3.
  
 0.988
G3NUK0_GASAC
EBNA1 binding protein 2.
   
 0.984
G3PGG6_GASAC
RNA binding motif protein 28.
   
 
 0.979
G3N7R3_GASAC
RNA binding motif protein 34.
   
 0.977
G3NWQ5_GASAC
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.976
G3P9E6_GASAC
Glutamate-rich WD repeat containing 1.
   
 
 0.975
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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