STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N740_GASACUncharacterized protein. (816 aa)    
Predicted Functional Partners:
SUGP1
SURP and G-patch domain containing 1.
   
 0.924
G3P8Z0_GASAC
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.840
G3PNF0_GASAC
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.840
G3NYR2_GASAC
Cell division cycle and apoptosis regulator 1.
   
 0.817
G3PT86_GASAC
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.817
G3QCN2_GASAC
IK cytokine.
   
  0.817
G3NI77_GASAC
Splicing factor 3b, subunit 4.
    
 
 0.793
G3PEN4_GASAC
G patch domain and KOW motifs.
   
 
 0.762
G3NEV4_GASAC
RNA helicase.
   
 0.751
G3Q648_GASAC
RNA binding motif protein 17.
   
 
 0.738
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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