Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N747_GASACLeucine-rich repeats and calponin homology (CH) domain containing 4. (680 aa)    
Predicted Functional Partners:
G3NCV1_GASAC
APC membrane recruitment protein 2.
    
 0.684
G3Q6Q6_GASAC
ArfGAP with coiled-coil, ankyrin repeat and PH domains 1.
   
  
 0.642
G3Q7H8_GASAC
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 
 0.563
G3PBH5_GASAC
Ribosomal protein S6 kinase.
    
 
 0.561
G3NDH4_GASAC
NudC domain containing 1.
    
   0.557
G3NLD5_GASAC
Zinc finger, CCCH-type with G patch domain.
      
 0.556
G3Q087_GASAC
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
    
   0.550
G3NY48_GASAC
Zinc finger, AN1-type domain 4.
    
 0.537
G3N9S3_GASAC
Mesencephalic astrocyte-derived neurotrophic factor.
      
 0.527
G3Q4M1_GASAC
Ankyrin repeat domain 46b.
   
 0.514
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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