STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N752_GASACHistone H2A; Belongs to the histone H2A family. (149 aa)    
Predicted Functional Partners:
G3N6U1_GASAC
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.953
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.951
G3NIY0_GASAC
AT rich interactive domain 4A (RBP1-like).
   
 0.941
G3NK22_GASAC
Translocase of outer mitochondrial membrane 20.
   
 0.941
G3Q8S3_GASAC
Dpy-30 histone methyltransferase complex regulatory subunit.
   
 0.940
G3NJ04_GASAC
Retinoblastoma binding protein 5.
    
 0.933
G3N724_GASAC
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.929
G3NIH4_GASAC
Vacuolar protein sorting 72 homolog a.
    
 
 0.922
G3NMN1_GASAC
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.922
G3P1Q7_GASAC
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.922
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.