STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N755_GASACMLLT3 super elongation complex subunit. (523 aa)    
Predicted Functional Partners:
G3Q3M8_GASAC
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 0.931
G3NC28_GASAC
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.923
G3PVC9_GASAC
Uncharacterized protein.
    
 0.920
G3QBZ7_GASAC
AF4/FMR2 family, member 4.
    
 0.920
G3P7H8_GASAC
DNA methyltransferase 1 associated protein 1.
   
 0.913
G3PGP0_GASAC
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.904
G3NA65_GASAC
ELL associated factor 1.
   
 0.902
G3NG72_GASAC
Polymerase (RNA) II (DNA directed) polypeptide J.
   
 0.898
G3PNN5_GASAC
ELL associated factor 2.
   
 0.882
G3NU38_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.871
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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