STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N760_GASACUbiquitin carboxyl-terminal hydrolase. (963 aa)    
Predicted Functional Partners:
G3QA52_GASAC
Ubiquitin B.
    
 0.896
G3P1Y2_GASAC
Spliceosome associated factor 3, U4/U6 recycling protein.
    
 
 0.885
G3PYF8_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.820
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.815
G3PCG6_GASAC
Ribosomal protein S27a.
    
 0.746
G3PT97_GASAC
Ubiquitin carboxyl-terminal hydrolase.
   
0.726
G3NQJ7_GASAC
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.710
SMURF2
E3 ubiquitin-protein ligase.
   
 0.700
G3NVD5_GASAC
E3 ubiquitin-protein ligase.
    
 0.699
SMURF1
E3 ubiquitin-protein ligase.
    
 0.699
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.