STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N771_GASACSerine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (512 aa)    
Predicted Functional Partners:
G3Q005_GASAC
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.979
G3Q8A0_GASAC
LTV1 ribosome biogenesis factor.
   
 0.964
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.960
G3PJC8_GASAC
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.950
G3PSC5_GASAC
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.939
G3PEB8_GASAC
Partner of NOB1 homolog.
   
 0.911
G3N7T4_GASAC
Bystin-like.
   
 0.910
G3P5K4_GASAC
RIO kinase 2 (yeast).
   
 
0.908
RPS3A
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.908
G3N6G5_GASAC
GRIP and coiled-coil domain containing 1.
   
 0.907
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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