STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N777_GASACNudix (nucleoside diphosphate linked moiety X)-type motif 17. (310 aa)    
Predicted Functional Partners:
G3NXD4_GASAC
Nudix (nucleoside diphosphate linked moiety X)-type motif 14.
      
 0.592
G3PXW8_GASAC
Nudix (nucleoside diphosphate linked moiety X)-type motif 22.
      
 0.592
G3Q638_GASAC
Nudix (nucleoside diphosphate linked moiety X)-type motif 5; Belongs to the Nudix hydrolase family.
      
 0.592
G3PP99_GASAC
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
      
 0.519
G3PTK8_GASAC
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
      
 0.518
G3PVB0_GASAC
Nudix (nucleoside diphosphate linked moiety X)-type motif 19.
      
 0.517
G3P2B6_GASAC
Nudix (nucleoside diphosphate linked moiety X)-type motif 2.
      
 0.508
G3PWU4_GASAC
Nudix (nucleoside diphosphate linked moiety X)-type motif 6.
      
 0.497
G3PM45_GASAC
Nudix (nucleoside diphosphate linked moiety X)-type motif 15; Belongs to the Nudix hydrolase family.
   
  
 0.485
G3PM23_GASAC
Nudix (nucleoside diphosphate linked moiety X)-type motif 1; Belongs to the Nudix hydrolase family.
      
 0.472
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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