Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N788_GASACSi:ch211-188f17.1. (1572 aa)    
Predicted Functional Partners:
G3NJ56_GASAC
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
    
 0.825
G3PCG6_GASAC
Ribosomal protein S27a.
    
  0.819
G3Q9I7_GASAC
Angiomotin.
    
 0.819
G3QA52_GASAC
Ubiquitin B.
    
 0.814
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.778
G3NCN1_GASAC
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.759
G3NRR0_GASAC
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.759
SGK1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.759
PTCH1
Patched 1.
    
 0.752
G3PKV6_GASAC
Patched 2.
    
 0.752
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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