Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N7D0_GASACTHUMP domain containing 3. (507 aa)    
Predicted Functional Partners:
G3PXS4_GASAC
tRNA methyltransferase subunit 11-2.
    
 
 0.960
G3PBQ2_GASAC
SET domain containing 5.
      
 0.846
G3PBC3_GASAC
Intersectin 2a.
   
 0.838
G3PUV9_GASAC
Intersectin 2b.
   
 0.838
G3Q3Z7_GASAC
Mitochondrial calcium uptake family, member 3b.
    
   0.833
G3Q453_GASAC
Mitochondrial calcium uptake family, member 3a.
    
   0.833
G3Q7C9_GASAC
THUMP domain containing 1.
    
   0.718
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
    
 
 0.694
G3PBG4_GASAC
Intersectin 1 (SH3 domain protein).
   
 0.690
G3NRS2_GASAC
tRNA methyltransferase 11 homolog.
     
 0.681
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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