STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N7D6_GASACFras1 related extracellular matrix 1a. (2182 aa)    
Predicted Functional Partners:
G3N9V8_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.912
G3NA85_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.912
G3P1U2_GASAC
Integrin, alpha 8; Belongs to the integrin alpha chain family.
   
 
 0.907
G3PZW7_GASAC
Nephronectin a.
    
 0.831
G3N4L1_GASAC
Glutamate receptor interacting protein 1.
    
 0.612
G3NFV3_GASAC
Carbonic anhydrase Va; Belongs to the alpha-carbonic anhydrase family.
      
 0.551
G3PJ32_GASAC
Poly (ADP-ribose) polymerase family, member 12a.
      
 0.549
G3N437_GASAC
Protein tyrosine phosphatase receptor type T.
   
 0.546
G3NZD8_GASAC
Protein tyrosine phosphatase receptor type K.
   
 0.546
G3PP31_GASAC
Major facilitator superfamily domain containing 12a.
     
 0.546
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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