STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTBP2Polypyrimidine tract binding protein 2a. (522 aa)    
Predicted Functional Partners:
G3NXK6_GASAC
Heterogeneous nuclear ribonucleoprotein K.
   
 0.844
G3PUV4_GASAC
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.844
G3Q0U4_GASAC
RRM domain-containing protein.
   
 0.805
G3Q573_GASAC
RRM domain-containing protein.
   
 0.805
G3NVS9_GASAC
Ribonucleoprotein, PTB-binding 2.
   
 0.800
G3PKX0_GASAC
Ribonucleoprotein, PTB-binding 1.
   
 0.800
G3ND78_GASAC
Uncharacterized protein.
   
 0.790
G3PFB4_GASAC
Heterogeneous nuclear ribonucleoprotein L2.
   
 0.790
G3Q7P1_GASAC
RRM domain-containing protein.
   
 0.790
G3Q9S3_GASAC
RRM domain-containing protein.
   
 0.790
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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