STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNV1Potassium voltage-gated channel modifier subfamily V member 1; Belongs to the potassium channel family. (432 aa)    
Predicted Functional Partners:
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.924
G3NE82_GASAC
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
    
  0.912
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
  
 0.731
G3NFG6_GASAC
Ribosomal protein L21.
  
 0.717
G3Q7P8_GASAC
Ribosomal protein L34.
  
 0.717
G3N640_GASAC
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.709
G3NVH0_GASAC
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.709
G3NH71_GASAC
Ribosomal protein L35.
  
 0.708
G3N5P1_GASAC
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.707
G3NHE9_GASAC
Ribosomal protein L30.
   
 0.707
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.