Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3N7G9_GASACActin binding LIM protein family, member 2. (604 aa)    
Predicted Functional Partners:
KDM1B
Lysine demethylase 1B.
    
   0.829
SH3TC1
SH3 domain and tetratricopeptide repeats 1.
      
 0.805
G3P4E9_GASAC
Adducin 3 (gamma) b.
   
 0.680
G3PIL4_GASAC
Adducin 2 (beta).
   
 0.680
G3PW37_GASAC
Adducin 1 (alpha).
   
 0.680
G3Q4E1_GASAC
Adducin 3 (gamma) a.
   
 0.680
G3NP38_GASAC
Smoothelin, like.
      
 0.665
G3QC60_GASAC
Calponin-homology (CH) domain-containing protein.
      
 0.665
G3PFS8_GASAC
Mesoderm development LRP chaperone.
      
 0.622
G3NDM6_GASAC
MYST/Esa1-associated factor 6.
      
 0.615
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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