STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N7H3_GASACLanC lantibiotic synthetase component C-like 2 (bacterial). (409 aa)    
Predicted Functional Partners:
G3Q6G2_GASAC
Deoxyribose-phosphate aldolase (putative).
    
   0.747
G3Q1G7_GASAC
RB1-inducible coiled-coil 1.
      
 0.653
G3PTW0_GASAC
Cysteine-rich hydrophobic domain 2.
      
 0.649
G3Q5W7_GASAC
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.635
G3NLJ3_GASAC
Nuclear receptor binding protein 2b.
    
   0.596
G3NJG5_GASAC
Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family.
    
 
 0.591
G3NRB2_GASAC
Aldehyde dehydrogenase 16 family, member A1.
    
 
 0.591
G3NS30_GASAC
Dual oxidase 2.
      
 0.588
G3P1V3_GASAC
MINDY lysine 48 deubiquitinase 3.
    
   0.572
G3N4T1_GASAC
IRS-type PTB domain-containing protein.
    
   0.554
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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