STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N7H4_GASACZinc finger, CCHC domain containing 4. (492 aa)    
Predicted Functional Partners:
G3PMT0_GASAC
Aminoadipate-semialdehyde dehydrogenase.
   
    0.844
G3P7P0_GASAC
Nucleolar protein 6.
   
    0.815
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
    0.784
G3Q096_GASAC
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
   
    0.784
G3NJ92_GASAC
Mitochondrial ribosomal protein L2.
   
    0.783
G3NN94_GASAC
Mitochondrial ribosomal protein L38.
   
    0.783
G3PAE1_GASAC
Mediator complex subunit 22.
   
    0.783
G3Q409_GASAC
Prefoldin subunit 6.
   
    0.783
G3NPB2_GASAC
Pre-mRNA processing factor 38A.
   
    0.746
G3N4L7_GASAC
PRP38_assoc domain-containing protein.
   
    0.744
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.