STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N7I6_GASACCadherin_C domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins. (165 aa)    
Predicted Functional Partners:
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
   
0.884
G3NRM5_GASAC
Catenin (cadherin-associated protein), beta 1.
    
 0.859
G3Q1L6_GASAC
Catenin (cadherin-associated protein), alpha 2.
   
 0.858
G3Q378_GASAC
Catenin (cadherin-associated protein), alpha 1.
   
 0.858
G3PKU1_GASAC
Cadherin 13, H-cadherin (heart).
 
   
 0.787
G3N550_GASAC
Uncharacterized protein.
    
 0.776
G3Q2Y3_GASAC
Junction plakoglobin a.
    
 0.776
G3PRR0_GASAC
Cadherin 16, KSP-cadherin.
 
   
 0.770
G3N636_GASAC
Cadherin 12, type 2a (N-cadherin 2); Cadherins are calcium-dependent cell adhesion proteins.
   
 
 
0.768
G3NCE4_GASAC
Cadherin 31; Cadherins are calcium-dependent cell adhesion proteins.
     
 
0.765
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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