Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N7K1_GASACInterferon regulatory factor 6. (515 aa)    
Predicted Functional Partners:
G3PYF8_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.790
G3PBM0_GASAC
CREB binding protein b.
    
 0.722
G3Q4J0_GASAC
CREB binding protein a.
    
 0.722
G3QCI8_GASAC
Interferon regulatory factor.
   
 0.719
G3NH35_GASAC
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.712
G3P4K7_GASAC
Grainyhead-like transcription factor 3.
    
 
 0.650
G3NL69_GASAC
Follistatin a.
     
 0.643
G3NW76_GASAC
Serine/threonine-protein kinase PLK.
   
 0.627
G3PKU2_GASAC
Serine/threonine-protein kinase PLK.
   
 0.627
PLK1
Serine/threonine-protein kinase PLK.
   
 0.627
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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