STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N7L6_GASACDimer_Tnp_hAT domain-containing protein. (428 aa)    
Predicted Functional Partners:
G3NZ66_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.622
G3P2F4_GASAC
Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.622
G3PSG8_GASAC
Small ubiquitin-related modifier.
    
  0.520
G3NJG9_GASAC
Potassium channel tetramerization domain containing 2.
    
  0.513
G3NKE9_GASAC
Chromodomain helicase DNA binding protein 5.
    
  0.485
G3P6X0_GASAC
Uncharacterized protein.
    
  0.485
G3Q4D3_GASAC
Chromodomain helicase DNA binding protein 4a.
    
  0.485
G3Q6H2_GASAC
Chromodomain helicase DNA binding protein 3.
    
  0.485
G3N786_GASAC
Uncharacterized protein.
  
     0.480
G3NZK4_GASAC
Myb/SANT-like DNA-binding domain containing 4 with coiled-coils.
    
 
 0.448
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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