STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N7N0_GASACATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (639 aa)    
Predicted Functional Partners:
ASS1
Argininosuccinate synthase 1.
    
 0.816
G3NEY8_GASAC
Threonine aldolase 1.
    
  0.801
G3NG75_GASAC
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.794
G3QB01_GASAC
Argininosuccinate lyase.
    
 0.793
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
    
  0.784
G3PT47_GASAC
Caspase recruitment domain family, member 9.
  
 
  0.775
G3Q5R3_GASAC
Pyridine nucleotide-disulphide oxidoreductase domain 1.
    
 0.756
G3P780_GASAC
Arginase.
    
 0.677
G3PAM8_GASAC
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
    
 0.677
G3PFK8_GASAC
Arginase.
    
 0.677
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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