STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF3Serine and arginine rich splicing factor 3b. (165 aa)    
Predicted Functional Partners:
G3PII4_GASAC
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.991
G3Q963_GASAC
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.990
G3N9B9_GASAC
RRM domain-containing protein.
  
0.988
G3PFA2_GASAC
Uncharacterized protein.
  
0.988
G3NFF6_GASAC
Serine and arginine rich splicing factor 2a.
   
0.984
G3PPW2_GASAC
RRM domain-containing protein.
   
0.984
G3PAP2_GASAC
Uncharacterized protein.
   
0.980
SRSF1
Serine and arginine rich splicing factor 1.
   
0.980
G3NIC7_GASAC
Mago homolog, exon junction complex subunit.
   
 0.976
G3NUV9_GASAC
Transformer 2 alpha homolog.
   
 0.976
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.