G3N7S3_GASAC protein (Gasterosteus aculeatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

G3N7S3_GASAC

Uncharacterized protein. (983 aa)

Predicted Functional Partners:

G3PAJ2_GASAC

0.900

G3NSW4_GASAC

0.787

G3P856_GASAC

0.787

LAMA3

0.787

G3N7R1_GASAC

0.757

LAMC2

0.757

G3PTS4_GASAC

0.757

G3PCM1_GASAC

0.749

G3P1B4_GASAC

0.712

G3NM46_GASAC

0.700

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N7R1_GASAC	G3N7S3_GASAC	ENSGACP00000001344	ENSGACP00000001357	Uncharacterized protein.	Uncharacterized protein.	0.757
G3N7R1_GASAC	G3NSW4_GASAC	ENSGACP00000001344	ENSGACP00000008432	Uncharacterized protein.	Laminin, alpha 4.	0.863
G3N7R1_GASAC	G3P856_GASAC	ENSGACP00000001344	ENSGACP00000013780	Uncharacterized protein.	Laminin, alpha 5.	0.863
G3N7R1_GASAC	G3PAJ2_GASAC	ENSGACP00000001344	ENSGACP00000014616	Uncharacterized protein.	Uncharacterized protein.	0.414
G3N7R1_GASAC	G3PCM1_GASAC	ENSGACP00000001344	ENSGACP00000015345	Uncharacterized protein.	Uncharacterized protein.	0.940
G3N7R1_GASAC	LAMA3	ENSGACP00000001344	ENSGACP00000017593	Uncharacterized protein.	Laminin subunit alpha 3.	0.863
G3N7S3_GASAC	G3N7R1_GASAC	ENSGACP00000001357	ENSGACP00000001344	Uncharacterized protein.	Uncharacterized protein.	0.757
G3N7S3_GASAC	G3NM46_GASAC	ENSGACP00000001357	ENSGACP00000006409	Uncharacterized protein.	Agrin.	0.700
G3N7S3_GASAC	G3NSW4_GASAC	ENSGACP00000001357	ENSGACP00000008432	Uncharacterized protein.	Laminin, alpha 4.	0.787
G3N7S3_GASAC	G3P1B4_GASAC	ENSGACP00000001357	ENSGACP00000011387	Uncharacterized protein.	Tumor necrosis factor, alpha-induced protein 6.	0.712
G3N7S3_GASAC	G3P856_GASAC	ENSGACP00000001357	ENSGACP00000013780	Uncharacterized protein.	Laminin, alpha 5.	0.787
G3N7S3_GASAC	G3PAJ2_GASAC	ENSGACP00000001357	ENSGACP00000014616	Uncharacterized protein.	Uncharacterized protein.	0.900
G3N7S3_GASAC	G3PCM1_GASAC	ENSGACP00000001357	ENSGACP00000015345	Uncharacterized protein.	Uncharacterized protein.	0.749
G3N7S3_GASAC	G3PTS4_GASAC	ENSGACP00000001357	ENSGACP00000021011	Uncharacterized protein.	Laminin, gamma 3.	0.757
G3N7S3_GASAC	LAMA3	ENSGACP00000001357	ENSGACP00000017593	Uncharacterized protein.	Laminin subunit alpha 3.	0.787
G3N7S3_GASAC	LAMC2	ENSGACP00000001357	ENSGACP00000002193	Uncharacterized protein.	Laminin subunit gamma 2.	0.757
G3NM46_GASAC	G3N7S3_GASAC	ENSGACP00000006409	ENSGACP00000001357	Agrin.	Uncharacterized protein.	0.700
G3NM46_GASAC	G3NSW4_GASAC	ENSGACP00000006409	ENSGACP00000008432	Agrin.	Laminin, alpha 4.	0.574
G3NM46_GASAC	G3P1B4_GASAC	ENSGACP00000006409	ENSGACP00000011387	Agrin.	Tumor necrosis factor, alpha-induced protein 6.	0.473
G3NM46_GASAC	G3P856_GASAC	ENSGACP00000006409	ENSGACP00000013780	Agrin.	Laminin, alpha 5.	0.574