STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N7S8_GASACTransmembrane and coiled-coil domain family 2. (503 aa)    
Predicted Functional Partners:
TMCC3
Transmembrane and coiled-coil domain family 3.
   
 
 0.697
G3Q9E6_GASAC
Transmembrane and coiled-coil domain family 3.
   
 
 0.697
G3NGQ8_GASAC
Apolipoprotein Eb.
    
   0.552
G3N7T8_GASAC
Dual serine/threonine and tyrosine protein kinase.
      
 0.529
G3NZG4_GASAC
WD repeat domain 66.
      
 0.527
G3P2P7_GASAC
Heat shock 60 protein 1; Belongs to the chaperonin (HSP60) family.
    
   0.516
G3QA69_GASAC
A kinase (PRKA) anchor protein 10.
      
 0.501
GRTP1
Growth hormone regulated TBC protein 1.
      
 0.469
G3NGM2_GASAC
Amyloid beta (A4) precursor protein b.
    
 
 0.460
APP
Amyloid beta precursor protein.
    
 
 0.460
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.