Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N7T4_GASACBystin-like. (438 aa)    
Predicted Functional Partners:
G3P9S3_GASAC
TSR1 ribosome maturation factor.
   
 0.999
G3Q005_GASAC
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.999
G3Q8A0_GASAC
LTV1 ribosome biogenesis factor.
   
 0.999
G3NVZ3_GASAC
Ribosomal RNA processing 12 homolog.
   
 
 0.998
G3P5K4_GASAC
RIO kinase 2 (yeast).
   
 0.998
G3PEB8_GASAC
Partner of NOB1 homolog.
   
 0.998
G3PW45_GASAC
NOP14 nucleolar protein homolog (yeast).
   
 0.998
G3PHW5_GASAC
Nucleolar protein 10.
   
 
 0.995
G3PRJ4_GASAC
BMS1 ribosome biogenesis factor.
   
 
 0.995
G3Q046_GASAC
Nucleolar complex associated 4 homolog.
   
 0.995
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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