STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N7U1_GASACSubcommissural organ spondin. (5063 aa)    
Predicted Functional Partners:
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.871
G3NNM1_GASAC
Si:ch211-237i5.4.
    
 0.847
G3NPQ0_GASAC
Glycoprotein Ib platelet subunit beta.
   
 0.817
G3N9V8_GASAC
Integrin beta; Belongs to the integrin beta chain family.
   
 0.791
G3P1C9_GASAC
Integrin beta; Belongs to the integrin beta chain family.
   
 0.790
G3NA85_GASAC
Integrin beta; Belongs to the integrin beta chain family.
   
 0.789
G3NMX5_GASAC
Integrin beta.
    
 0.788
G3PQY8_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.788
G3PPI2_GASAC
GLE1 RNA export mediator.
   
 0.785
G3P1U2_GASAC
Integrin, alpha 8; Belongs to the integrin alpha chain family.
    
 0.774
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.