STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC2Leucine rich repeat containing 2. (365 aa)    
Predicted Functional Partners:
G3PJR9_GASAC
RNA 3'-terminal phosphate cyclase.
    
 
 0.673
G3PJP7_GASAC
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
      
 0.635
G3NTH2_GASAC
Uncharacterized protein.
      
 0.630
G3PJI3_GASAC
tRNA methyltransferase 13 homolog.
      
 0.618
G3NEQ5_GASAC
Protein phosphatase 1, regulatory subunit 42.
    
 0.592
G3NBD2_GASAC
Uncharacterized protein.
    
 
 0.569
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
  
 
 0.569
G3PJV7_GASAC
Diphthamide biosynthesis 5.
      
 0.560
G3P6N0_GASAC
Uncharacterized protein.
  
 
  0.555
G3NK27_GASAC
Uncharacterized protein.
    
   0.551
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.