STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N7V9_GASACSi:ch211-87m7.2. (490 aa)    
Predicted Functional Partners:
G3PFY1_GASAC
Solute carrier family 35 member A3a.
 
 
  
 0.661
MFSD3
Major facilitator superfamily domain containing 3.
      
 0.636
G3NV85_GASAC
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
   0.577
G3NEY0_GASAC
Major facilitator superfamily domain containing 9.
      
 0.550
G3Q0W2_GASAC
Solute carrier family 46 member 2.
      
 0.534
G3NW54_GASAC
Small ArfGAP2.
      
 0.471
G3PJI3_GASAC
tRNA methyltransferase 13 homolog.
      
 0.471
G3Q2T5_GASAC
Small ArfGAP 1.
      
 0.471
G3N4B9_GASAC
Uncharacterized protein.
      
 0.470
G3P406_GASAC
Major facilitator superfamily domain containing 5.
      
 0.470
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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