STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N7Z2_GASACL-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (334 aa)    
Predicted Functional Partners:
G3P9W8_GASAC
Citrate synthase; Belongs to the citrate synthase family.
  
 0.969
G3Q7Q6_GASAC
Malate synthase-like.
  
 0.967
G3PTN9_GASAC
Aspartate aminotransferase.
   
 0.928
G3Q870_GASAC
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 0.923
G3PWE5_GASAC
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.917
G3NTC2_GASAC
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.916
G3PCS9_GASAC
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.916
G3PEY0_GASAC
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 
 0.915
G3NY86_GASAC
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.907
G3PQ59_GASAC
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.907
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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