Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
G3N7Z4_GASACUncharacterized protein. (872 aa)    
Predicted Functional Partners:
G3NSE6_GASAC
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.988
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.980
ALYREF
Aly/REF export factor.
   
 0.976
G3PLP1_GASAC
Zinc finger CCCH-type containing 18.
   
 0.967
G3PV23_GASAC
Mtr4 exosome RNA helicase.
   
 0.964
ZFC3H1
Zinc finger C3H1-type containing.
    
 0.941
G3Q2C5_GASAC
RRM domain-containing protein.
   
 0.926
G3Q736_GASAC
Phosphorylated adaptor for RNA export.
   
 0.925
G3Q9D2_GASAC
Small nuclear ribonucleoprotein polypeptide F.
   
 
 0.903
G3QCM2_GASAC
Nuclear cap binding subunit 3.
   
 
 0.888
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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