STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD3AATPase family AAA domain containing 3A. (671 aa)    
Predicted Functional Partners:
G3N6W3_GASAC
ECSIT signalling integrator.
   
   0.849
G3P388_GASAC
Prohibitin.
   
 
 0.820
G3PEV5_GASAC
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
   0.815
PHB2
Prohibitin.
   
 
 0.793
G3NYR6_GASAC
Cytochrome P450, family 21, subfamily A, polypeptide 2; Belongs to the cytochrome P450 family.
      
 0.720
G3P7I0_GASAC
T-complex protein 1 subunit gamma.
   
 
 0.654
G3PHS6_GASAC
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.649
G3NFG6_GASAC
Ribosomal protein L21.
    
   0.642
G3NCP7_GASAC
Anaphase promoting complex subunit 16.
      
 0.620
G3NHT2_GASAC
Family with sequence similarity 210 member Ab.
    
 
 0.620
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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