STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N819_GASACRap guanine nucleotide exchange factor (GEF)-like 1. (479 aa)    
Predicted Functional Partners:
G3NNU9_GASAC
Urotensin-2 receptor 2.
      
 0.785
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 
 0.754
G3NQX8_GASAC
Lin-52 DREAM MuvB core complex component.
      
 0.735
G3P214_GASAC
Serine active site containing 1.
      
 0.637
G3NUJ6_GASAC
Phospholipase C, epsilon 1.
   
  
 0.632
G3P8P9_GASAC
Potassium channel, subfamily K, member 10b; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.626
G3NG66_GASAC
Uncharacterized protein.
    
 0.601
G3P981_GASAC
DIRAS family, GTP-binding RAS-like 1b.
    
 0.601
SIPA1
Signal-induced proliferation-associated 1.
   
 0.565
G3PFH3_GASAC
Coiled-coil domain containing 92.
      
 0.563
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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