G3N843_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

G3N843_GASAC

Uncharacterized protein. (206 aa)

Predicted Functional Partners:

G3NH35_GASAC

0.998

G3PYF8_GASAC

0.998

G3NJ16_GASAC

0.997

G3NBB2_GASAC

0.989

G3NSE7_GASAC

0.989

G3NTV9_GASAC

0.987

G3NTJ8_GASAC

0.986

G3NU66_GASAC

0.971

G3NJL3_GASAC

0.964

G3PBQ7_GASAC

0.952

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N843_GASAC	G3NBB2_GASAC	ENSGACP00000001477	ENSGACP00000002608	Uncharacterized protein.	Protein kinase domain-containing protein.	0.989
G3N843_GASAC	G3NH35_GASAC	ENSGACP00000001477	ENSGACP00000004643	Uncharacterized protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.998
G3N843_GASAC	G3NJ16_GASAC	ENSGACP00000001477	ENSGACP00000005326	Uncharacterized protein.	Interleukin-1 receptor-associated kinase 4.	0.997
G3N843_GASAC	G3NJL3_GASAC	ENSGACP00000001477	ENSGACP00000005520	Uncharacterized protein.	Protein kinase domain-containing protein.	0.964
G3N843_GASAC	G3NSE7_GASAC	ENSGACP00000001477	ENSGACP00000008264	Uncharacterized protein.	Mitogen-activated protein kinase kinase kinase 7.	0.989
G3N843_GASAC	G3NTJ8_GASAC	ENSGACP00000001477	ENSGACP00000008666	Uncharacterized protein.	TIR domain-containing protein.	0.986
G3N843_GASAC	G3NTV9_GASAC	ENSGACP00000001477	ENSGACP00000008777	Uncharacterized protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.987
G3N843_GASAC	G3NU66_GASAC	ENSGACP00000001477	ENSGACP00000008884	Uncharacterized protein.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.971
G3N843_GASAC	G3PBQ7_GASAC	ENSGACP00000001477	ENSGACP00000015031	Uncharacterized protein.	Interferon regulatory factor 7.	0.952
G3N843_GASAC	G3PYF8_GASAC	ENSGACP00000001477	ENSGACP00000022648	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.998
G3NBB2_GASAC	G3N843_GASAC	ENSGACP00000002608	ENSGACP00000001477	Protein kinase domain-containing protein.	Uncharacterized protein.	0.989
G3NBB2_GASAC	G3NH35_GASAC	ENSGACP00000002608	ENSGACP00000004643	Protein kinase domain-containing protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.958
G3NBB2_GASAC	G3NJ16_GASAC	ENSGACP00000002608	ENSGACP00000005326	Protein kinase domain-containing protein.	Interleukin-1 receptor-associated kinase 4.	0.940
G3NBB2_GASAC	G3NJL3_GASAC	ENSGACP00000002608	ENSGACP00000005520	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.973
G3NBB2_GASAC	G3NSE7_GASAC	ENSGACP00000002608	ENSGACP00000008264	Protein kinase domain-containing protein.	Mitogen-activated protein kinase kinase kinase 7.	0.902
G3NBB2_GASAC	G3NTJ8_GASAC	ENSGACP00000002608	ENSGACP00000008666	Protein kinase domain-containing protein.	TIR domain-containing protein.	0.670
G3NBB2_GASAC	G3NTV9_GASAC	ENSGACP00000002608	ENSGACP00000008777	Protein kinase domain-containing protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.988
G3NBB2_GASAC	G3NU66_GASAC	ENSGACP00000002608	ENSGACP00000008884	Protein kinase domain-containing protein.	Component of inhibitor of nuclear factor kappa B kinase complex.	0.990
G3NBB2_GASAC	G3PYF8_GASAC	ENSGACP00000002608	ENSGACP00000022648	Protein kinase domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.998
G3NH35_GASAC	G3N843_GASAC	ENSGACP00000004643	ENSGACP00000001477	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	Uncharacterized protein.	0.998